An Analysis on Scalable GPU Implementation of Minimap2 for Long Read Alignment

EasyChair Preprint no. 10933

Abstract

Scalability is a paramount requirement in genomics research, especially when dealing with large and complex genomic datasets. In this article, we explore the development of scalable GPU (Graphics Processing Unit) implementations of Minimap2, a versatile tool for long read alignment. These scalable implementations empower efficient and accurate alignment of long reads to reference genomes, facilitating the analysis of extensive genomic datasets.

Keyphrases: acceleration, CPU, GPU

@Booklet{EasyChair:10933,
  author = {Smith Milson and Kurez Oroy},
  title = {An Analysis on Scalable GPU Implementation of Minimap2 for Long Read Alignment},
  howpublished = {EasyChair Preprint no. 10933},

  year = {EasyChair, 2023}}